Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ALFI_RS04685 | Not Available | Positive | 1029433 - 1029729 | 11475.9 |
| aaa family atpase | ALFI_RS04690 | Not Available | Negative | 1029928 - 1031082 | 44210.3 |
| hypothetical protein | ALFI_RS16455 | Not Available | Negative | 1031347 - 1031625 | 10586.9 |
| ompa family protein | ALFI_RS04700 | Not Available | Negative | 1031630 - 1033288 | 64079.0 |
| duf3575 domain-containing protein | ALFI_RS04705 | Not Available | Negative | 1033291 - 1033845 | 20917.0 |
| duf4906 domain-containing protein | ALFI_RS04710 | Not Available | Negative | 1033860 - 1036418 | 95103.7 |
| fimb/mfa2 family fimbrial subunit | ALFI_RS04715 | Not Available | Negative | 1036481 - 1037512 | 35473.6 |
| duf1896 family protein | ALFI_RS04720 | Not Available | Negative | 1037540 - 1038052 | 20120.0 |
| duf3945 domain-containing protein | ALFI_RS04725 | Not Available | Negative | 1038065 - 1039342 | 48268.9 |
| fic family protein | ALFI_RS04730 | Not Available | Positive | 1039630 - 1041123 | 55835.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
