Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | ALFI_RS04640 | Not Available | Positive | 1020486 - 1021307 | 31789.5 |
| dna-directed rna polymerase subunit omega | ALFI_RS04645 | Not Available | Positive | 1021310 - 1021636 | 12727.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | ALFI_RS04650 | Not Available | Positive | 1021649 - 1022908 | 44470.7 |
| dna repair protein recn | ALFI_RS04655 | Not Available | Positive | 1022915 - 1024558 | 59645.2 |
| histidine phosphatase family protein | ALFI_RS04660 | Not Available | Positive | 1024634 - 1025221 | 22383.4 |
| chaperonin groel | ALFI_RS04665 | Not Available | Negative | 1025337 - 1026968 | 57619.5 |
| co-chaperone groes | ALFI_RS04670 | Not Available | Negative | 1026984 - 1027253 | 9434.6 |
| Trna-his | Not Available | Not Available | Positive | 1027475 - 1027548 | Not Available |
| site-specific integrase | ALFI_RS04680 | Not Available | Positive | 1027799 - 1029016 | 47193.3 |
| helix-turn-helix domain-containing protein | ALFI_RS16450 | Not Available | Positive | 1029144 - 1029428 | 10987.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
