Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS04555 | Not Available | Positive | 998170 - 999753 | 60017.7 |
| hypothetical protein | ALFI_RS04560 | Not Available | Positive | 999784 - 1000929 | 42056.9 |
| hypothetical protein | ALFI_RS04565 | Not Available | Positive | 1000938 - 1002794 | 69029.0 |
| hypothetical protein | ALFI_RS04570 | Not Available | Positive | 1002784 - 1004607 | 68461.3 |
| alpha/beta hydrolase | ALFI_RS04575 | Not Available | Positive | 1004591 - 1005556 | 36523.0 |
| hypothetical protein | ALFI_RS04580 | Not Available | Positive | 1005564 - 1007612 | 76112.1 |
| right-handed parallel beta-helix repeat-containing protein | ALFI_RS04585 | Not Available | Positive | 1007627 - 1009378 | 65334.8 |
| degt/dnrj/eryc1/strs family aminotransferase | ALFI_RS04595 | Not Available | Negative | 1010750 - 1011892 | 41190.6 |
| hypothetical protein | ALFI_RS17350 | Not Available | Negative | 1011914 - 1012135 | 8124.65 |
| hypothetical protein | ALFI_RS17670 | Not Available | Positive | 1012134 - 1012388 | 9211.25 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
