Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | ALFI_RS04505 | Not Available | Negative | 981794 - 983059 | 46113.7 |
| multidrug dmt transporter permease | ALFI_RS04510 | Not Available | Negative | 983040 - 983518 | 17179.9 |
| site-specific integrase | ALFI_RS04515 | Not Available | Positive | 983782 - 985011 | 47180.9 |
| is110 family transposase | ALFI_RS04520 | Not Available | Positive | 985392 - 986399 | 38067.6 |
| duf3408 domain-containing protein | ALFI_RS04525 | Not Available | Negative | 986804 - 987301 | 18941.6 |
| hypothetical protein | ALFI_RS17345 | Not Available | Positive | 987758 - 987991 | 9344.34 |
| transposase | ALFI_RS16440 | Not Available | Positive | 988352 - 988900 | 21385.3 |
| two-component regulator propeller domain-containing protein | ALFI_RS04540 | Not Available | Positive | 989105 - 993352 | 160279.0 |
| pkd domain-containing protein | ALFI_RS04545 | Not Available | Positive | 993731 - 995005 | 47437.3 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS04550 | Not Available | Positive | 995025 - 998156 | 115242.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
