Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase domain-containing protein | ALFI_RS04455 | Not Available | Negative | 966152 - 968557 | 90423.8 |
| hypothetical protein | ALFI_RS04460 | Not Available | Negative | 968598 - 971570 | 112251.0 |
| translation initiation factor | ALFI_RS04465 | Not Available | Negative | 971571 - 971918 | 12835.4 |
| duf4435 domain-containing protein | ALFI_RS04470 | Not Available | Positive | 972324 - 973415 | 42692.6 |
| aspartate kinase | ALFI_RS04475 | Not Available | Negative | 973601 - 974854 | 46785.3 |
| prolyl oligopeptidase family serine peptidase | ALFI_RS04480 | Not Available | Negative | 975006 - 977147 | 79363.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ALFI_RS04485 | Not Available | Positive | 977259 - 978086 | 30230.4 |
| biotin--[acetyl-coa-carboxylase] ligase | ALFI_RS04490 | Not Available | Positive | 978134 - 978886 | 28254.5 |
| glycosyltransferase | ALFI_RS04495 | Not Available | Positive | 978925 - 980133 | 46965.5 |
| oligosaccharide flippase family protein | ALFI_RS04500 | Not Available | Negative | 980249 - 981763 | 54321.5 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
