Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS04405 | Not Available | Negative | 951863 - 952372 | 18373.1 |
| glycosyl hydrolase family 18 protein | ALFI_RS04410 | Not Available | Negative | 952657 - 953640 | 35500.8 |
| glycosyl hydrolase family 18 protein | ALFI_RS04415 | Not Available | Negative | 953737 - 955359 | 60382.2 |
| bt_3987 domain-containing protein | ALFI_RS04420 | Not Available | Negative | 955363 - 956718 | 50920.4 |
| glycoside hydrolase family 18 | ALFI_RS04425 | Not Available | Negative | 956727 - 957656 | 34067.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS04430 | Not Available | Negative | 957662 - 959251 | 59085.8 |
| tonb-dependent receptor | ALFI_RS04435 | Not Available | Negative | 959264 - 962464 | 117473.0 |
| fecr family protein | ALFI_RS04440 | Not Available | Negative | 962783 - 963739 | 36040.4 |
| rna polymerase sigma-70 factor | ALFI_RS04445 | Not Available | Positive | 964260 - 964844 | 22827.3 |
| aspartate-semialdehyde dehydrogenase | ALFI_RS04450 | Not Available | Negative | 965030 - 966022 | 36364.9 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
