Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1735 and lamg domain-containing protein | ALFI_RS04355 | Not Available | Negative | 938259 - 939434 | 42282.9 |
| glycoside hydrolase family 18 | ALFI_RS04360 | Not Available | Negative | 939447 - 940496 | 38728.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS04365 | Not Available | Negative | 940516 - 942105 | 58615.4 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS04370 | Not Available | Negative | 942121 - 945528 | 125896.0 |
| fecr family protein | ALFI_RS04375 | Not Available | Negative | 945693 - 946634 | 35536.1 |
| rna polymerase sigma-70 factor | ALFI_RS04380 | Not Available | Negative | 946737 - 947273 | 20971.5 |
| superoxide dismutase | ALFI_RS04385 | Not Available | Negative | 947544 - 948191 | 24535.2 |
| rubredoxin | ALFI_RS04390 | Not Available | Negative | 948207 - 948374 | 6140.18 |
| tryptophanase | ALFI_RS04395 | Not Available | Positive | 948499 - 949875 | 51915.3 |
| dihydrodipicolinate synthase family protein | ALFI_RS04400 | Not Available | Positive | 950426 - 951325 | 32133.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
