Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiester glycosidase family protein | ALFI_RS04255 | Not Available | Positive | 917177 - 918025 | 30768.8 |
| glycosyltransferase family 9 protein | ALFI_RS04260 | Not Available | Negative | 918372 - 919397 | 37580.9 |
| duf4254 domain-containing protein | ALFI_RS04265 | Not Available | Negative | 919381 - 919986 | 23732.2 |
| glucosaminidase domain-containing protein | ALFI_RS04270 | Not Available | Positive | 920062 - 921069 | 38236.0 |
| hypothetical protein | ALFI_RS04275 | Not Available | Positive | 921085 - 921771 | 26830.8 |
| s9 family peptidase | ALFI_RS04280 | Not Available | Positive | 921785 - 923920 | 80785.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | ALFI_RS04285 | Not Available | Positive | 923932 - 924429 | 17949.7 |
| nadh-quinone oxidoreductase subunit n | ALFI_RS04290 | Not Available | Negative | 924606 - 926033 | 51635.4 |
| nuom family protein | ALFI_RS04295 | Not Available | Negative | 926040 - 927524 | 53720.7 |
| nadh-quinone oxidoreductase subunit l | ALFI_RS04300 | Not Available | Negative | 927537 - 929429 | 69220.6 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
