Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS04145 | Not Available | Negative | 890513 - 890713 | 7741.42 |
| hypothetical protein | ALFI_RS04150 | Not Available | Negative | 891069 - 891497 | 15759.2 |
| sh3 beta-barrel fold-containing protein | ALFI_RS04155 | Not Available | Negative | 892009 - 892374 | 14335.2 |
| tyrosine-type recombinase/integrase | ALFI_RS04165 | Not Available | Negative | 893934 - 895325 | 53681.5 |
| Trna-val | Not Available | Not Available | Positive | 895471 - 895548 | Not Available |
| pl29 family lyase n-terminal domain-containing protein | ALFI_RS16425 | Not Available | Negative | 896506 - 899607 | 113195.0 |
| leucine-rich repeat protein | ALFI_RS16430 | Not Available | Negative | 899647 - 901623 | 72353.8 |
| hypothetical protein | ALFI_RS16870 | Not Available | Negative | 901641 - 901862 | 8014.58 |
| duf262 domain-containing protein | ALFI_RS16435 | Not Available | Negative | 902634 - 904256 | 62595.1 |
| duf3871 family protein | ALFI_RS04190 | Not Available | Negative | 904339 - 905412 | 40604.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
