Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobv family relaxase | ALFI_RS03480 | Not Available | Negative | 793657 - 795204 | 59724.9 |
| duf6371 domain-containing protein | ALFI_RS03485 | Not Available | Negative | 795355 - 796383 | 38941.4 |
| yfji family protein | ALFI_RS03490 | Not Available | Negative | 796376 - 797875 | 57145.4 |
| helix-turn-helix domain-containing protein | ALFI_RS03495 | Not Available | Negative | 797868 - 798197 | 12939.4 |
| hypothetical protein | ALFI_RS03500 | Not Available | Negative | 798538 - 799209 | 25094.6 |
| multidrug dmt transporter permease | ALFI_RS03505 | Not Available | Negative | 799267 - 800627 | 51703.0 |
| duf2795 domain-containing protein | ALFI_RS03510 | Not Available | Negative | 800860 - 801081 | 8652.77 |
| fructose-6-phosphate aldolase | ALFI_RS03515 | Not Available | Positive | 801516 - 802172 | 23558.5 |
| hu family dna-binding protein | ALFI_RS03520 | Not Available | Negative | 802240 - 802518 | 10390.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | ALFI_RS03525 | Not Available | Negative | 802686 - 803393 | 27149.9 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
