Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | ALFI_RS03430 | Not Available | Positive | 776127 - 777335 | 43591.0 |
| conjugative transposon protein tran | ALFI_RS03435 | Not Available | Positive | 777337 - 778242 | 33220.3 |
| atp-binding cassette domain-containing protein | ALFI_RS03440 | Not Available | Negative | 778691 - 780601 | 73600.3 |
| duf262 domain-containing protein | ALFI_RS03445 | Not Available | Negative | 780598 - 783486 | 113125.0 |
| hypothetical protein | ALFI_RS03450 | Not Available | Negative | 784140 - 785057 | 36416.1 |
| helix-turn-helix domain-containing protein | ALFI_RS03455 | Not Available | Positive | 785450 - 785653 | 7686.48 |
| is110 family transposase | ALFI_RS03460 | Not Available | Negative | 785717 - 786685 | 35640.4 |
| class i sam-dependent dna methyltransferase | ALFI_RS03465 | Not Available | Positive | 786900 - 788909 | 76442.1 |
| restriction endonuclease subunit s | ALFI_RS16165 | Not Available | Positive | 788906 - 790222 | 50100.2 |
| dead/deah box helicase family protein | ALFI_RS03475 | Not Available | Positive | 790237 - 793563 | 128545.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
