Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | ALFI_RS00115 | Not Available | Positive | 11787 - 12581 | 29282.0 |
| metal abc transporter solute-binding protein, zn/mn family | ALFI_RS00120 | Not Available | Positive | 12574 - 13479 | 33655.1 |
| metal abc transporter atp-binding protein | ALFI_RS00125 | Not Available | Positive | 13476 - 14246 | 28444.4 |
| hypothetical protein | ALFI_RS00130 | Not Available | Negative | 14348 - 14638 | 11261.6 |
| hypothetical protein | ALFI_RS00135 | Not Available | Negative | 14795 - 15712 | 34046.9 |
| helix-turn-helix domain-containing protein | ALFI_RS00140 | Not Available | Positive | 15786 - 16400 | 23402.5 |
| is3 family transposase | ALFI_RS00145 | Not Available | Positive | 16331 - 17218 | 34767.5 |
| pg0541 family transporter-associated protein | ALFI_RS00150 | Not Available | Negative | 17492 - 17785 | 10837.8 |
| efflux rnd transporter permease subunit | ALFI_RS00155 | Not Available | Negative | 17802 - 20942 | 114998.0 |
| efflux rnd transporter periplasmic adaptor subunit | ALFI_RS00160 | Not Available | Negative | 20957 - 21967 | 36722.4 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
