Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | ALFI_RS03140 | Not Available | Positive | 727876 - 728406 | 19223.8 |
| Trna-pseudo | Not Available | Not Available | Positive | 728616 - 728679 | Not Available |
| helix-turn-helix domain-containing protein | ALFI_RS17235 | Not Available | Negative | 728786 - 729190 | 15258.5 |
| hypothetical protein | ALFI_RS03150 | Not Available | Positive | 729298 - 729522 | 8509.28 |
| dna-binding protein | ALFI_RS03155 | Not Available | Positive | 729524 - 729892 | 14324.5 |
| hypothetical protein | ALFI_RS03160 | Not Available | Positive | 730040 - 730417 | 14924.8 |
| multidrug dmt transporter permease | ALFI_RS03165 | Not Available | Negative | 730501 - 731034 | 20948.4 |
| helix-turn-helix domain-containing protein | ALFI_RS03170 | Not Available | Negative | 731320 - 731844 | 20115.7 |
| repb family plasmid replication initiator protein | ALFI_RS03175 | Not Available | Positive | 732073 - 733200 | 43968.3 |
| para family protein | ALFI_RS03180 | Not Available | Positive | 733223 - 733978 | 28279.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
