Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | ALFI_RS03090 | Not Available | Positive | 712124 - 712678 | 21685.3 |
| fecr family protein | ALFI_RS03095 | Not Available | Positive | 712820 - 713803 | 37226.6 |
| tonb-dependent receptor | ALFI_RS03100 | Not Available | Positive | 713910 - 717470 | 130108.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS03105 | Not Available | Positive | 717484 - 718944 | 55194.6 |
| glycerophosphodiester phosphodiesterase family protein | ALFI_RS03110 | Not Available | Positive | 718957 - 720378 | 51464.6 |
| pkd domain-containing protein | ALFI_RS03115 | Not Available | Positive | 720407 - 722260 | 64976.2 |
| endonuclease/exonuclease/phosphatase family protein | ALFI_RS03120 | Not Available | Positive | 722335 - 724356 | 72301.6 |
| glycerophosphodiester phosphodiesterase family protein | ALFI_RS03125 | Not Available | Positive | 724408 - 725322 | 34151.2 |
| endonuclease/exonuclease/phosphatase family protein | ALFI_RS03130 | Not Available | Positive | 725332 - 726216 | 33710.6 |
| mfs transporter | ALFI_RS03135 | Not Available | Positive | 726253 - 727626 | 48843.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
