Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacon domain-containing protein | ALFI_RS03040 | Not Available | Positive | 695868 - 698306 | 88783.5 |
| hypothetical protein | ALFI_RS03045 | Not Available | Positive | 698326 - 700641 | 85479.5 |
| endonuclease/exonuclease/phosphatase family protein | ALFI_RS03050 | Not Available | Positive | 700672 - 701580 | 34786.8 |
| endonuclease/exonuclease/phosphatase family protein | ALFI_RS03055 | Not Available | Positive | 701636 - 702484 | 32281.6 |
| tonb-dependent receptor | ALFI_RS03060 | Not Available | Negative | 702780 - 705173 | 88454.8 |
| hypothetical protein | ALFI_RS16835 | Not Available | Negative | 705307 - 705678 | 13979.6 |
| hypothetical protein | ALFI_RS03070 | Not Available | Positive | 705742 - 706014 | 10661.7 |
| tolc family protein | ALFI_RS03075 | Not Available | Negative | 706131 - 707453 | 49833.0 |
| efflux rnd transporter permease subunit | ALFI_RS03080 | Not Available | Negative | 707450 - 710491 | 112495.0 |
| efflux rnd transporter periplasmic adaptor subunit | ALFI_RS03085 | Not Available | Negative | 710504 - 711586 | 39141.5 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
