Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ALFI_RS02990 | Not Available | Negative | 681252 - 682007 | 28443.1 |
| mlae family abc transporter permease | ALFI_RS02995 | Not Available | Negative | 682004 - 682747 | 26936.0 |
| duf4834 family protein | ALFI_RS03000 | Not Available | Negative | 682751 - 683167 | 15419.0 |
| adenylosuccinate lyase | ALFI_RS03005 | Not Available | Positive | 683267 - 684613 | 50548.6 |
| hypothetical protein | ALFI_RS03010 | Not Available | Positive | 685023 - 686936 | 67585.8 |
| amino acid permease | ALFI_RS03015 | Not Available | Positive | 687397 - 688863 | 52841.1 |
| rna polymerase sigma-70 factor | ALFI_RS03020 | Not Available | Positive | 689101 - 689658 | 21571.1 |
| fecr family protein | ALFI_RS03025 | Not Available | Positive | 689791 - 690792 | 38380.4 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS03030 | Not Available | Positive | 691301 - 694342 | 112316.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS03035 | Not Available | Positive | 694361 - 695857 | 56493.2 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
