Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-like domain-containing protein | ALFI_RS02945 | Not Available | Negative | 672900 - 673742 | 31496.6 |
| pepsy-like domain-containing protein | ALFI_RS02950 | Not Available | Negative | 673768 - 674211 | 16560.9 |
| sensor histidine kinase | ALFI_RS02955 | Not Available | Negative | 674322 - 675602 | 48292.2 |
| response regulator transcription factor | ALFI_RS02960 | Not Available | Negative | 675599 - 676276 | 25957.1 |
| beta-ketoacyl-acp synthase iii | ALFI_RS02965 | Not Available | Negative | 676486 - 677514 | 36947.0 |
| phosphate acyltransferase plsx | ALFI_RS02970 | Not Available | Negative | 677540 - 678487 | 32783.8 |
| 50s ribosomal protein l32 | ALFI_RS16385 | Not Available | Negative | 678639 - 678824 | 6859.36 |
| yced family protein | ALFI_RS02975 | Not Available | Negative | 678882 - 679466 | 22172.2 |
| hypothetical protein | ALFI_RS02980 | Not Available | Positive | 679641 - 680051 | 15015.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | ALFI_RS02985 | Not Available | Negative | 680118 - 681134 | 36354.5 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
