Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeca family protein | ALFI_RS17230 | Not Available | Positive | 661066 - 664896 | 146193.0 |
| hypothetical protein | ALFI_RS16380 | Not Available | Positive | 665265 - 665990 | 27956.9 |
| doxx family protein | ALFI_RS02905 | Not Available | Negative | 666636 - 667076 | 15767.7 |
| secondary thiamine-phosphate synthase enzyme yjbq | ALFI_RS02910 | Not Available | Positive | 667241 - 667651 | 15214.2 |
| duf6582 domain-containing protein | ALFI_RS02915 | Not Available | Positive | 667736 - 667996 | 9655.32 |
| gh92 family glycosyl hydrolase | ALFI_RS02920 | Not Available | Negative | 668238 - 670373 | 79326.3 |
| yqaa family protein | ALFI_RS02925 | Not Available | Positive | 670499 - 670957 | 16361.5 |
| gnat family n-acetyltransferase | ALFI_RS02930 | Not Available | Positive | 670969 - 671421 | 16839.2 |
| duf5131 family protein | ALFI_RS02935 | Not Available | Positive | 671428 - 672153 | 27956.4 |
| ferritin | ALFI_RS02940 | Not Available | Negative | 672205 - 672729 | 19761.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
