Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ALFI_RS02800 | Not Available | Positive | 640060 - 640434 | 14692.4 |
| aaa family atpase | ALFI_RS02805 | Not Available | Positive | 640437 - 641507 | 40416.3 |
| plasmid mobilization protein | ALFI_RS02810 | Not Available | Positive | 641822 - 642241 | 15693.8 |
| relaxase/mobilization nuclease domain-containing protein | ALFI_RS02815 | Not Available | Positive | 642238 - 643449 | 46252.1 |
| hypothetical protein | ALFI_RS02820 | Not Available | Positive | 643454 - 643981 | 19635.5 |
| hypothetical protein | ALFI_RS02825 | Not Available | Negative | 644042 - 644428 | 14048.1 |
| tyrosine-type recombinase/integrase | ALFI_RS02830 | Not Available | Negative | 644534 - 645460 | 35879.0 |
| restriction endonuclease subunit s | ALFI_RS16360 | Not Available | Positive | 645519 - 646601 | 40234.5 |
| restriction endonuclease subunit s | ALFI_RS16365 | Not Available | Negative | 646594 - 647166 | 21453.2 |
| restriction endonuclease subunit s | ALFI_RS02840 | Not Available | Positive | 647222 - 647764 | 20389.4 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
