Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | ALFI_RS00065 | Not Available | Positive | 3008 - 3541 | 19166.8 |
| hypothetical protein | ALFI_RS00070 | Not Available | Positive | 3664 - 3876 | 8102.73 |
| thioredoxin-dependent thiol peroxidase | ALFI_RS00075 | Not Available | Positive | 3960 - 4421 | 17330.4 |
| hypothetical protein | ALFI_RS00080 | Not Available | Positive | 4426 - 4905 | 18114.9 |
| recombinase reca | ALFI_RS00085 | Not Available | Positive | 4934 - 5950 | 36667.4 |
| rela/spot family protein | ALFI_RS00090 | Not Available | Positive | 5957 - 8197 | 85050.5 |
| hypothetical protein | ALFI_RS00095 | Not Available | Positive | 8199 - 8684 | 18102.9 |
| hit family protein | ALFI_RS00100 | Not Available | Positive | 9144 - 9530 | 14438.6 |
| helix-turn-helix domain-containing protein | ALFI_RS00105 | Not Available | Positive | 10190 - 10657 | 17343.7 |
| paai family thioesterase | ALFI_RS00110 | Not Available | Negative | 10898 - 11392 | 19132.7 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
