Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS02705 | Not Available | Positive | 618221 - 618583 | 13467.5 |
| helix-turn-helix domain-containing protein | ALFI_RS02710 | Not Available | Negative | 618666 - 618971 | 11900.3 |
| helix-turn-helix domain-containing protein | ALFI_RS02715 | Not Available | Negative | 619002 - 619295 | 11305.9 |
| helix-turn-helix domain-containing protein | ALFI_RS02720 | Not Available | Positive | 619518 - 619862 | 12880.5 |
| helix-turn-helix domain-containing protein | ALFI_RS02725 | Not Available | Positive | 619866 - 620216 | 13925.9 |
| duf3945 domain-containing protein | ALFI_RS02730 | Not Available | Positive | 620237 - 621838 | 60926.4 |
| type ia dna topoisomerase | ALFI_RS02735 | Not Available | Positive | 621901 - 623991 | 77565.1 |
| duf1896 domain-containing protein | ALFI_RS02740 | Not Available | Positive | 624159 - 624611 | 17250.1 |
| n-6 dna methylase | ALFI_RS02745 | Not Available | Positive | 624601 - 630453 | 221330.0 |
| tetracycline resistance ribosomal protection protein tet(q) | ALFI_RS02750 | Not Available | Positive | 631111 - 633036 | 72226.1 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
