Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ALFI_RS02605 | Not Available | Positive | 599354 - 599626 | 10461.7 |
| helix-turn-helix domain-containing protein | ALFI_RS02610 | Not Available | Positive | 599634 - 599873 | 9091.0 |
| aaa family atpase | ALFI_RS02615 | Not Available | Positive | 599892 - 601877 | 75084.1 |
| hypothetical protein | ALFI_RS02620 | Not Available | Positive | 601907 - 602191 | 10374.8 |
| recombinase rect | ALFI_RS02625 | Not Available | Positive | 602200 - 603141 | 34676.2 |
| mbl fold metallo-hydrolase | ALFI_RS02630 | Not Available | Positive | 603159 - 603896 | 27229.4 |
| hypothetical protein | ALFI_RS16155 | Not Available | Positive | 604287 - 605009 | 28168.7 |
| hypothetical protein | ALFI_RS02640 | Not Available | Positive | 605053 - 605400 | 13768.4 |
| rna-directed dna polymerase | ALFI_RS02645 | Not Available | Positive | 605682 - 606719 | 40715.9 |
| hypothetical protein | ALFI_RS02650 | Not Available | Positive | 606685 - 607101 | 15356.7 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
