Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | ALFI_RS02555 | Not Available | Positive | 590959 - 591834 | 32776.5 |
| duf5683 domain-containing protein | ALFI_RS02560 | Not Available | Positive | 591838 - 592998 | 43789.6 |
| lytic transglycosylase domain-containing protein | ALFI_RS02565 | Not Available | Positive | 593002 - 594384 | 51603.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | ALFI_RS02570 | Not Available | Positive | 594386 - 595816 | 50747.2 |
| site-specific integrase | ALFI_RS02575 | Not Available | Positive | 596034 - 597173 | 44150.0 |
| hypothetical protein | ALFI_RS02580 | Not Available | Negative | 597205 - 597432 | 8834.68 |
| dna damage-inducible protein d | ALFI_RS02585 | Not Available | Negative | 597471 - 598301 | 31520.9 |
| hypothetical protein | ALFI_RS02590 | Not Available | Negative | 598313 - 598654 | 12389.8 |
| hypothetical protein | ALFI_RS02595 | Not Available | Positive | 598873 - 599118 | 9372.22 |
| hypothetical protein | ALFI_RS02600 | Not Available | Positive | 599115 - 599363 | 9531.84 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
