Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s46 family peptidase | ALFI_RS02450 | Not Available | Negative | 561054 - 563225 | 82349.8 |
| 4fe-4s binding protein | ALFI_RS02455 | Not Available | Negative | 563282 - 565234 | 72879.1 |
| fimbrillin family protein | ALFI_RS02460 | Not Available | Negative | 565272 - 566876 | 57004.1 |
| duf6850 family outer membrane beta-barrel protein | ALFI_RS02465 | Not Available | Negative | 566894 - 568393 | 56389.1 |
| duf4876 domain-containing protein | ALFI_RS02470 | Not Available | Negative | 568397 - 569626 | 45001.3 |
| tonb-dependent receptor | ALFI_RS02475 | Not Available | Negative | 569632 - 572460 | 103709.0 |
| abc transporter atp-binding protein | ALFI_RS02480 | Not Available | Positive | 572901 - 573590 | 25110.4 |
| abc transporter permease | ALFI_RS02485 | Not Available | Positive | 573587 - 574843 | 46302.6 |
| abc transporter permease | ALFI_RS02490 | Not Available | Positive | 574850 - 576109 | 46338.9 |
| efflux rnd transporter periplasmic adaptor subunit | ALFI_RS02495 | Not Available | Positive | 576135 - 577244 | 40898.2 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
