Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS02405 | Not Available | Negative | 547530 - 548270 | 29153.7 |
| is110 family transposase | ALFI_RS02410 | Not Available | Negative | 548581 - 549549 | 35640.4 |
| mobv family relaxase | ALFI_RS02415 | Not Available | Negative | 551134 - 552573 | 54969.9 |
| site-specific integrase | ALFI_RS02420 | Not Available | Negative | 552953 - 554176 | 47276.6 |
| hypothetical protein | ALFI_RS16820 | Not Available | Negative | 554645 - 554815 | 6463.15 |
| thiamine pyrophosphate-dependent enzyme | ALFI_RS02425 | Not Available | Positive | 555078 - 556679 | 57454.6 |
| indolepyruvate oxidoreductase subunit beta | ALFI_RS02430 | Not Available | Positive | 556761 - 557345 | 20538.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | ALFI_RS02435 | Not Available | Positive | 557345 - 558658 | 48647.2 |
| acetyl-coa hydrolase/transferase family protein | ALFI_RS02440 | Not Available | Positive | 558663 - 559955 | 46108.4 |
| had hydrolase-like protein | ALFI_RS02445 | Not Available | Positive | 560112 - 560759 | 23846.4 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
