Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | ALFI_RS02345 | Not Available | Negative | 534648 - 536060 | 51078.6 |
| duf4373 domain-containing protein | ALFI_RS02350 | Not Available | Negative | 536032 - 536898 | 33062.0 |
| helix-turn-helix domain-containing protein | ALFI_RS02365 | Not Available | Negative | 537426 - 537785 | 13515.2 |
| hypothetical protein | ALFI_RS02370 | Not Available | Negative | 537903 - 538703 | 30851.3 |
| site-specific integrase | ALFI_RS02375 | Not Available | Negative | 538710 - 539930 | 46181.7 |
| thioredoxin | ALFI_RS02380 | Not Available | Positive | 540572 - 541036 | 16865.3 |
| 4fe-4s binding protein | ALFI_RS02385 | Not Available | Positive | 541044 - 541247 | 7323.01 |
| marr family transcriptional regulator | ALFI_RS02390 | Not Available | Positive | 541231 - 541584 | 13334.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS02395 | Not Available | Negative | 542270 - 544018 | 65900.0 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS02400 | Not Available | Negative | 544038 - 547070 | 111829.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
