Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 97 protein | ALFI_RS02095 | Not Available | Negative | 476760 - 478700 | 72876.7 |
| glycoside hydrolase family 125 protein | ALFI_RS02100 | Not Available | Negative | 478770 - 480326 | 58036.1 |
| glycoside hydrolase family 76 protein | ALFI_RS02105 | Not Available | Negative | 480361 - 481551 | 43934.4 |
| gdsl-type esterase/lipase family protein | ALFI_RS02110 | Not Available | Negative | 481562 - 482281 | 26873.6 |
| hybrid sensor histidine kinase/response regulator transcription factor | ALFI_RS02115 | Not Available | Positive | 482558 - 486616 | 153481.0 |
| glycoside hydrolase family 76 protein | ALFI_RS02120 | Not Available | Negative | 486856 - 488067 | 45243.6 |
| suse domain-containing protein | ALFI_RS02125 | Not Available | Negative | 488132 - 490273 | 78430.5 |
| suse domain-containing protein | ALFI_RS02130 | Not Available | Negative | 490289 - 491413 | 40988.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS02135 | Not Available | Negative | 491441 - 493093 | 62376.9 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS02140 | Not Available | Negative | 493109 - 496240 | 116487.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
