Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase family protein | ALFI_RS02045 | Not Available | Negative | 460732 - 462765 | 73629.6 |
| atp-dependent clp protease atp-binding subunit clpx | ALFI_RS02050 | Not Available | Negative | 462836 - 464113 | 47145.3 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | ALFI_RS02055 | Not Available | Negative | 464113 - 464781 | 24310.4 |
| trigger factor | ALFI_RS02060 | Not Available | Negative | 465008 - 466333 | 50678.3 |
| glutaminyl-peptide cyclotransferase | ALFI_RS02065 | Not Available | Positive | 466663 - 467454 | 29048.4 |
| methionine synthase | ALFI_RS02070 | Not Available | Positive | 467455 - 471066 | 131855.0 |
| methylenetetrahydrofolate reductase | ALFI_RS02075 | Not Available | Positive | 471125 - 472090 | 35642.0 |
| m20 family metallopeptidase | ALFI_RS02080 | Not Available | Positive | 472096 - 473208 | 40519.4 |
| ribonuclease r | ALFI_RS02085 | Not Available | Positive | 473205 - 475436 | 85113.2 |
| cofh family radical sam protein | ALFI_RS02090 | Not Available | Positive | 475440 - 476570 | 42343.9 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
