Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS01995 | Not Available | Negative | 451372 - 451953 | 20998.9 |
| hypothetical protein | ALFI_RS02000 | Not Available | Negative | 452348 - 452920 | 20566.8 |
| rna polymerase sigma factor | ALFI_RS02005 | Not Available | Negative | 452932 - 453423 | 19211.9 |
| site-specific integrase | ALFI_RS02010 | Not Available | Positive | 453751 - 454983 | 47210.3 |
| hypothetical protein | ALFI_RS02015 | Not Available | Positive | 455001 - 455393 | 14496.8 |
| mobv family relaxase | ALFI_RS02020 | Not Available | Positive | 455987 - 457354 | 52634.9 |
| duf1266 domain-containing protein | ALFI_RS02025 | Not Available | Positive | 457691 - 458428 | 28178.4 |
| hypothetical protein | ALFI_RS02030 | Not Available | Positive | 458475 - 458933 | 16827.7 |
| toxin-antitoxin system ywqk family antitoxin | ALFI_RS02035 | Not Available | Positive | 459039 - 459779 | 28692.5 |
| duf4948 family protein | ALFI_RS02040 | Not Available | Positive | 459786 - 460367 | 22110.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
