Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | ALFI_RS01940 | Not Available | Positive | 439136 - 439510 | 14295.2 |
| hypothetical protein | ALFI_RS01945 | Not Available | Positive | 439517 - 439729 | 7343.88 |
| m56 family metallopeptidase | ALFI_RS01950 | Not Available | Positive | 439823 - 441997 | 78909.1 |
| hypothetical protein | ALFI_RS01955 | Not Available | Negative | 442370 - 443809 | 51466.6 |
| uracil-dna glycosylase | ALFI_RS01965 | Not Available | Positive | 444645 - 445307 | 24701.5 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | ALFI_RS01970 | Not Available | Positive | 445520 - 446413 | 31778.5 |
| rna polymerase sigma factor rpod/siga | ALFI_RS01975 | Not Available | Negative | 446610 - 447470 | 32669.0 |
| do family serine endopeptidase | ALFI_RS01980 | Not Available | Negative | 447525 - 448997 | 52448.8 |
| methionine adenosyltransferase | ALFI_RS01985 | Not Available | Negative | 449173 - 450477 | 47900.9 |
| hypothetical protein | ALFI_RS01990 | Not Available | Positive | 450852 - 451247 | 15151.7 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
