Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein a | ALFI_RS01890 | Not Available | Positive | 425313 - 426587 | 47072.5 |
| metallophosphoesterase family protein | ALFI_RS01895 | Not Available | Positive | 426588 - 427082 | 18303.1 |
| hypothetical protein | ALFI_RS01900 | Not Available | Negative | 427152 - 427868 | 26403.0 |
| hypothetical protein | ALFI_RS01905 | Not Available | Positive | 428226 - 429455 | 44985.3 |
| atp-dependent clp protease atp-binding subunit | ALFI_RS01910 | Not Available | Positive | 429641 - 432094 | 91853.0 |
| tetratricopeptide repeat-containing sensor histidine kinase | ALFI_RS01915 | Not Available | Positive | 432287 - 434302 | 76814.1 |
| mate family efflux transporter | ALFI_RS01920 | Not Available | Positive | 434407 - 435768 | 49681.9 |
| regulatory iron-sulfur-containing complex subunit rict | ALFI_RS01925 | Not Available | Positive | 435820 - 437454 | 61116.0 |
| hypothetical protein | ALFI_RS01930 | Not Available | Positive | 437697 - 438209 | 18352.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | ALFI_RS01935 | Not Available | Positive | 438215 - 438964 | 29394.8 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
