Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS01845 | Not Available | Positive | 413285 - 413686 | 15452.6 |
| hypothetical protein | ALFI_RS17310 | Not Available | Positive | 413699 - 414382 | 25571.5 |
| hypothetical protein | ALFI_RS17315 | Not Available | Positive | 414407 - 415477 | 40315.6 |
| hypothetical protein | ALFI_RS01855 | Not Available | Positive | 415731 - 417560 | 67680.4 |
| amp-binding protein | ALFI_RS01860 | Not Available | Negative | 417927 - 419603 | 61694.8 |
| trna epoxyqueuosine(34) reductase queg | ALFI_RS01865 | Not Available | Positive | 419703 - 420611 | 32933.5 |
| tetratricopeptide repeat protein | ALFI_RS01870 | Not Available | Negative | 420829 - 421788 | 34123.6 |
| nucleoside deaminase | ALFI_RS01875 | Not Available | Negative | 421882 - 422331 | 16146.4 |
| aspartate--trna ligase | ALFI_RS01880 | Not Available | Positive | 422477 - 424231 | 66802.9 |
| hypothetical protein | ALFI_RS16810 | Not Available | Negative | 424419 - 424934 | 20259.9 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
