Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-beta-n-acetylmuramidase namz domain-containing protein | ALFI_RS01795 | Not Available | Negative | 398263 - 399600 | 48539.7 |
| peptide chain release factor 2 | ALFI_RS01800 | Not Available | Negative | 399642 - 400754 | 42205.8 |
| aaa family atpase | ALFI_RS01805 | Not Available | Negative | 400787 - 401422 | 23183.6 |
| mate family efflux transporter | ALFI_RS01810 | Not Available | Negative | 401432 - 402838 | 51199.4 |
| cysteine--trna ligase | ALFI_RS01815 | Not Available | Negative | 403060 - 404535 | 55597.9 |
| dead/deah box helicase | ALFI_RS01820 | Not Available | Positive | 404725 - 406146 | 52127.8 |
| m15 family metallopeptidase | ALFI_RS01825 | Not Available | Negative | 406271 - 406939 | 25201.4 |
| alpha-l-fucosidase | ALFI_RS01830 | Not Available | Negative | 407138 - 409180 | 75688.7 |
| duf2723 domain-containing protein | ALFI_RS01835 | Not Available | Positive | 409481 - 412711 | 123194.0 |
| hypothetical protein | ALFI_RS01840 | Not Available | Negative | 412669 - 413286 | 22378.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
