Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| N-acetylmuramoyl-l-alanine amidase | ALFI_RS03820 | Not Available | Negative | 843726 - 844208 | 17711.0 |
| Structural protein | ALFI_RS03825 | Not Available | Negative | 844213 - 845304 | 39798.7 |
| Capsid and scaffold protein | ALFI_RS03830 | Not Available | Negative | 845334 - 846266 | 34444.2 |
| Trna-met; | Not Available | Not Available | Positive | 846343 - 846415 | Not Available |
| terminase gpp n-terminus-related dna-binding protein | ALFI_RS03840 | Not Available | Positive | 846557 - 847030 | 17330.8 |
| Terminase | ALFI_RS03845 | Not Available | Positive | 847033 - 848565 | 59264.3 |
| hypothetical protein | ALFI_RS03850 | Not Available | Positive | 848559 - 848789 | 8895.37 |
| phage protein gp36 family protein | ALFI_RS03855 | Not Available | Positive | 848793 - 849212 | 15990.7 |
| Hypothetical protein | ALFI_RS03860 | Not Available | Positive | 849246 - 850484 | 46423.5 |
| Head morphogenesis protein | ALFI_RS03865 | Not Available | Positive | 850577 - 852064 | 56343.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
