Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | ALFI_RS01605 | Not Available | Negative | 345278 - 346429 | 43289.0 |
| rhomboid family intramembrane serine protease | ALFI_RS01610 | Not Available | Negative | 346434 - 347042 | 22967.1 |
| dna mismatch repair endonuclease mutl | ALFI_RS01615 | Not Available | Negative | 347238 - 349277 | 73008.0 |
| hypothetical protein | ALFI_RS01620 | Not Available | Negative | 349278 - 349727 | 17307.4 |
| molecular chaperone dnaj | ALFI_RS01625 | Not Available | Negative | 349935 - 351101 | 41271.0 |
| nucleotide exchange factor grpe | ALFI_RS01630 | Not Available | Negative | 351106 - 351705 | 21749.5 |
| sam-dependent methyltransferase | ALFI_RS01635 | Not Available | Negative | 351772 - 352482 | 26006.7 |
| hypothetical protein | ALFI_RS01640 | Not Available | Negative | 352461 - 352970 | 17815.5 |
| alanine racemase | ALFI_RS01645 | Not Available | Negative | 352975 - 355353 | 86899.5 |
| endonuclease muts2 | ALFI_RS01650 | Not Available | Negative | 355436 - 357925 | 92457.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
