Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | ALFI_RS01555 | Not Available | Positive | 329823 - 331079 | 48911.6 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS01560 | Not Available | Positive | 331337 - 334636 | 122895.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS01565 | Not Available | Positive | 334658 - 336259 | 59631.6 |
| putative zinc-binding metallopeptidase | ALFI_RS01570 | Not Available | Positive | 336290 - 337180 | 33838.2 |
| duf4302 domain-containing protein | ALFI_RS01575 | Not Available | Positive | 337193 - 338992 | 64775.2 |
| s8 family serine peptidase | ALFI_RS01580 | Not Available | Positive | 339582 - 341438 | 65015.8 |
| lipocalin family protein | ALFI_RS01585 | Not Available | Positive | 341457 - 341924 | 16972.0 |
| fpra family a-type flavoprotein | ALFI_RS01590 | Not Available | Positive | 342176 - 343363 | 44085.7 |
| udp-glucose dehydrogenase family protein | ALFI_RS01595 | Not Available | Positive | 343390 - 344703 | 48319.5 |
| yhch/yjgk/yial family protein | ALFI_RS01600 | Not Available | Negative | 344816 - 345265 | 16913.4 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
