Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | ALFI_RS01505 | Not Available | Negative | 309876 - 311078 | 46259.3 |
| duf4302 domain-containing protein | ALFI_RS01510 | Not Available | Negative | 311472 - 313391 | 69739.2 |
| putative zinc-binding metallopeptidase | ALFI_RS01515 | Not Available | Negative | 313408 - 314301 | 33839.9 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS01520 | Not Available | Negative | 314339 - 315910 | 59472.1 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS01525 | Not Available | Negative | 315926 - 319219 | 122121.0 |
| lipocalin family protein | ALFI_RS01530 | Not Available | Negative | 319573 - 320040 | 16840.1 |
| s8 family serine peptidase | ALFI_RS01535 | Not Available | Negative | 320059 - 322089 | 70752.0 |
| hypothetical protein | ALFI_RS01540 | Not Available | Negative | 322168 - 324621 | 87904.2 |
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS01545 | Not Available | Negative | 324659 - 326275 | 59653.7 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS01550 | Not Available | Negative | 326301 - 329498 | 116835.0 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
