Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like domain-containing protein | ALFI_RS01360 | Not Available | Negative | 280514 - 281701 | 44467.2 |
| copper homeostasis protein cutc | ALFI_RS01365 | Not Available | Negative | 281698 - 282432 | 26124.3 |
| hsp20/alpha crystallin family protein | ALFI_RS01370 | Not Available | Negative | 282731 - 283168 | 16608.6 |
| crp/fnr family transcriptional regulator | ALFI_RS01375 | Not Available | Positive | 283390 - 283953 | 21667.8 |
| mate family efflux transporter | ALFI_RS01380 | Not Available | Positive | 284028 - 285380 | 49068.7 |
| peptide deformylase | ALFI_RS01385 | Not Available | Negative | 285435 - 286025 | 21662.3 |
| gnat family n-acetyltransferase | ALFI_RS01390 | Not Available | Positive | 286144 - 286722 | 21334.2 |
| helix-turn-helix domain-containing protein | ALFI_RS01395 | Not Available | Negative | 286764 - 286931 | 6480.67 |
| nucleoid-associated protein | ALFI_RS01400 | Not Available | Negative | 287714 - 288754 | 40296.0 |
| nad(p)h-dependent flavin oxidoreductase | ALFI_RS01405 | Not Available | Positive | 288899 - 289840 | 33125.2 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
