Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase | ALFI_RS01310 | Not Available | Positive | 270553 - 271395 | 30742.2 |
| yran family protein | ALFI_RS01315 | Not Available | Positive | 271401 - 271766 | 13654.3 |
| 3-deoxy-d-manno-octulosonic acid transferase | ALFI_RS01320 | Not Available | Positive | 271905 - 273131 | 47243.0 |
| histidine-type phosphatase | ALFI_RS01325 | Not Available | Negative | 273502 - 274779 | 47580.1 |
| serine dehydratase subunit alpha family protein | ALFI_RS01330 | Not Available | Negative | 274791 - 276077 | 45671.7 |
| nudix hydrolase | ALFI_RS01335 | Not Available | Positive | 276152 - 276709 | 20884.7 |
| acyltransferase | ALFI_RS01340 | Not Available | Negative | 276710 - 277777 | 39875.7 |
| nitroreductase family protein | ALFI_RS01345 | Not Available | Negative | 277957 - 278643 | 24536.5 |
| 4fe-4s dicluster domain-containing protein | ALFI_RS01350 | Not Available | Positive | 278775 - 279683 | 31148.4 |
| gnat family n-acetyltransferase | ALFI_RS01355 | Not Available | Positive | 279685 - 280338 | 23962.3 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
