Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | ALFI_RS01260 | Not Available | Negative | 262208 - 263095 | 34767.5 |
| transposase | ALFI_RS01265 | Not Available | Negative | 263082 - 263549 | 17967.1 |
| peptide deformylase | ALFI_RS01270 | Not Available | Negative | 263636 - 264181 | 20870.0 |
| holliday junction resolvase ruvx | ALFI_RS01275 | Not Available | Negative | 264178 - 264591 | 15371.7 |
| glycine--trna ligase | ALFI_RS01280 | Not Available | Negative | 264602 - 266146 | 59725.1 |
| radc family protein | ALFI_RS01285 | Not Available | Negative | 266569 - 267204 | 23033.8 |
| ribonuclease iii | ALFI_RS01290 | Not Available | Negative | 267298 - 267996 | 26442.2 |
| beta-ketoacyl-acp synthase ii | ALFI_RS01295 | Not Available | Negative | 268092 - 269339 | 44497.6 |
| acyl carrier protein | ALFI_RS01300 | Not Available | Negative | 269381 - 269617 | 8677.21 |
| dipeptidase pepe | ALFI_RS01305 | Not Available | Positive | 269796 - 270497 | 26192.8 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
