Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ALFI_RS16140 | Not Available | Positive | 251849 - 252298 | 16539.8 |
| 30s ribosomal protein s16 | ALFI_RS16325 | Not Available | Positive | 252806 - 253360 | 19671.3 |
| ribosome maturation factor rimm | ALFI_RS01220 | Not Available | Positive | 253573 - 254238 | 23819.4 |
| trna 2-thiouridine(34) synthase mnma | ALFI_RS01225 | Not Available | Positive | 254254 - 255570 | 48335.4 |
| mmcq/yjbr family dna-binding protein | ALFI_RS01230 | Not Available | Positive | 255670 - 256044 | 14512.3 |
| helix-turn-helix domain-containing protein | ALFI_RS01235 | Not Available | Positive | 256220 - 256447 | 8541.5 |
| hypothetical protein | ALFI_RS01240 | Not Available | Positive | 256458 - 257408 | 35909.4 |
| pyruvate, phosphate dikinase | ALFI_RS01245 | Not Available | Positive | 257581 - 260310 | 100143.0 |
| outer membrane beta-barrel protein | ALFI_RS01250 | Not Available | Positive | 260500 - 260988 | 17449.9 |
| outer membrane beta-barrel protein | ALFI_RS01255 | Not Available | Positive | 261543 - 262127 | 21852.2 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
