Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | ALFI_RS01000 | Not Available | Positive | 214783 - 216531 | 64910.7 |
| helix-turn-helix domain-containing protein | ALFI_RS01005 | Not Available | Positive | 216763 - 217404 | 24648.4 |
| is3 family transposase | ALFI_RS01010 | Not Available | Positive | 217335 - 218222 | 34767.5 |
| hypothetical protein | ALFI_RS01015 | Not Available | Positive | 219351 - 219878 | 19266.9 |
| mobb family relaxase | ALFI_RS01020 | Not Available | Positive | 219857 - 222667 | 108660.0 |
| hypothetical protein | ALFI_RS01025 | Not Available | Positive | 222669 - 222923 | 9483.93 |
| hypothetical protein | ALFI_RS01030 | Not Available | Positive | 222920 - 223357 | 16602.3 |
| type iv secretory system conjugative dna transfer family protein | ALFI_RS01035 | Not Available | Positive | 223360 - 224988 | 60992.8 |
| hypothetical protein | ALFI_RS01040 | Not Available | Positive | 224997 - 225281 | 10352.0 |
| hypothetical protein | ALFI_RS01050 | Not Available | Positive | 225526 - 228033 | 95516.4 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
