Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m16 family metallopeptidase | ALFI_RS00845 | Not Available | Positive | 188372 - 189676 | 48547.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | ALFI_RS17300 | Not Available | Negative | 189915 - 190649 | 27455.1 |
| gnat family n-acetyltransferase | ALFI_RS00855 | Not Available | Negative | 191068 - 191349 | 9837.81 |
| hypothetical protein | ALFI_RS00860 | Not Available | Negative | 191598 - 191840 | 9616.28 |
| hypothetical protein | ALFI_RS00865 | Not Available | Negative | 192055 - 192273 | 8245.35 |
| dna helicase recq | ALFI_RS00870 | Not Available | Negative | 192350 - 194542 | 82226.8 |
| porin | ALFI_RS00875 | Not Available | Positive | 194812 - 196035 | 45206.8 |
| lps export abc transporter atp-binding protein | ALFI_RS00880 | Not Available | Positive | 196336 - 197124 | 29550.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ALFI_RS00885 | Not Available | Positive | 197196 - 198440 | 44438.3 |
| chorismate synthase | ALFI_RS00890 | Not Available | Positive | 198445 - 199419 | 34381.9 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
