Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pl29 family lyase n-terminal domain-containing protein | ALFI_RS09030 | Not Available | Negative | 2076213 - 2078357 | 79543.1 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | ALFI_RS09035 | Not Available | Negative | 2078706 - 2081981 | 121311.0 |
| sulfatase | ALFI_RS09040 | Not Available | Negative | 2082005 - 2083555 | 59052.5 |
| beta-mannosidase | ALFI_RS09045 | Not Available | Negative | 2083552 - 2086146 | 97638.8 |
| multidrug dmt transporter permease | ALFI_RS09050 | Not Available | Positive | 2086384 - 2087310 | 34524.8 |
| beta-galactosidase small subunit family protein | ALFI_RS09055 | Not Available | Positive | 2087474 - 2088667 | 43547.3 |
| beta-galactosidase trimerization domain-containing protein | ALFI_RS09060 | Not Available | Positive | 2088671 - 2090650 | 73569.9 |
| hypothetical protein | ALFI_RS09075 | Not Available | Positive | 2092543 - 2092875 | 12646.2 |
| dna cytosine methyltransferase | ALFI_RS09080 | Not Available | Positive | 2092938 - 2094686 | 64976.8 |
| dna-binding protein | ALFI_RS09085 | Not Available | Positive | 2095794 - 2096687 | 34470.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
