Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | ALFI_RS08980 | Not Available | Negative | 2060716 - 2061561 | 31998.4 |
| rsiv family protein | ALFI_RS08985 | Not Available | Negative | 2062659 - 2063396 | 26873.8 |
| Trna-glu | Not Available | Not Available | Positive | 2063538 - 2063609 | Not Available |
| ribosome hibernation-promoting factor, hpf/yfia family | ALFI_RS08995 | Not Available | Negative | 2063885 - 2064181 | 11257.5 |
| tyrosine-type recombinase/integrase | ALFI_RS09000 | Not Available | Negative | 2064206 - 2065108 | 34726.9 |
| alpha/beta hydrolase | ALFI_RS09005 | Not Available | Positive | 2065161 - 2065979 | 30333.3 |
| multidrug dmt transporter permease | ALFI_RS17705 | Not Available | Positive | 2065988 - 2066548 | 20729.0 |
| mfs transporter | ALFI_RS09015 | Not Available | Positive | 2067004 - 2068179 | 41702.0 |
| ig-like domain-containing alpha-2-macroglobulin family protein | ALFI_RS09020 | Not Available | Negative | 2068367 - 2073619 | 193698.0 |
| penicillin-binding protein 1c | ALFI_RS09025 | Not Available | Positive | 2073659 - 2075968 | 85279.5 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
