Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | ALFI_RS08930 | Not Available | Positive | 2047589 - 2049235 | 61035.1 |
| hypothetical protein | ALFI_RS08935 | Not Available | Positive | 2049279 - 2051819 | 92529.6 |
| s8 family peptidase | ALFI_RS08940 | Not Available | Positive | 2051917 - 2053905 | 69969.7 |
| lipocalin family protein | ALFI_RS08945 | Not Available | Positive | 2053920 - 2054384 | 17404.1 |
| rtec domain-containing protein | ALFI_RS08950 | Not Available | Positive | 2054837 - 2055238 | 15497.0 |
| site-specific integrase | ALFI_RS08955 | Not Available | Negative | 2055290 - 2056510 | 47416.7 |
| Trna-leu | Not Available | Not Available | Positive | 2056796 - 2056880 | Not Available |
| nad(p)/fad-dependent oxidoreductase | ALFI_RS08965 | Not Available | Positive | 2056979 - 2058532 | 56066.2 |
| cdp-glycerol glycerophosphotransferase family protein | ALFI_RS08970 | Not Available | Positive | 2058556 - 2059623 | 41538.1 |
| glycosyltransferase family 2 protein | ALFI_RS08975 | Not Available | Negative | 2059683 - 2060687 | 38505.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
