Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is256 family transposase | ALFI_RS08845 | Not Available | Negative | 2019697 - 2020902 | 45579.9 |
| hypothetical protein | ALFI_RS16920 | Not Available | Negative | 2020954 - 2021193 | 8719.67 |
| site-specific tyrosine recombinase/integron integrase | ALFI_RS08850 | Not Available | Negative | 2021196 - 2022188 | 38189.5 |
| restriction endonuclease subunit s | ALFI_RS16565 | Not Available | Positive | 2022385 - 2022915 | 20020.6 |
| frg domain-containing protein | ALFI_RS08855 | Not Available | Positive | 2022993 - 2024276 | 48689.2 |
| type i restriction endonuclease subunit r | ALFI_RS08860 | Not Available | Positive | 2024284 - 2027325 | 115971.0 |
| is110 family transposase | ALFI_RS08865 | Not Available | Positive | 2027752 - 2028759 | 38067.6 |
| duf3408 domain-containing protein | ALFI_RS08870 | Not Available | Negative | 2029207 - 2029725 | 19531.0 |
| hypothetical protein | ALFI_RS08875 | Not Available | Positive | 2029911 - 2030414 | 19019.8 |
| is3 family transposase | ALFI_RS08880 | Not Available | Positive | 2030411 - 2031301 | 34853.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
