Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALFI_RS08805 | Not Available | Positive | 2011174 - 2011458 | 11082.3 |
| hypothetical protein | ALFI_RS16915 | Not Available | Negative | 2011710 - 2011916 | 7562.9 |
| hypothetical protein | ALFI_RS17420 | Not Available | Negative | 2012609 - 2013031 | 15750.2 |
| rhum family protein | ALFI_RS08810 | Not Available | Positive | 2012939 - 2013871 | 35580.4 |
| toxin-antitoxin system ywqk family antitoxin | ALFI_RS17425 | Not Available | Positive | 2013905 - 2014654 | 28550.0 |
| is110 family transposase | ALFI_RS08820 | Not Available | Positive | 2014848 - 2015816 | 35640.4 |
| hypothetical protein | ALFI_RS08825 | Not Available | Positive | 2015912 - 2016400 | 17957.9 |
| type i restriction-modification system subunit m | ALFI_RS08830 | Not Available | Positive | 2016561 - 2018114 | 57909.8 |
| restriction endonuclease subunit s | ALFI_RS16560 | Not Available | Positive | 2018120 - 2019232 | 41780.4 |
| restriction endonuclease subunit s | ALFI_RS08840 | Not Available | Negative | 2019229 - 2019504 | 10494.5 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
