Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | ALFI_RS08760 | Not Available | Positive | 2000159 - 2000743 | 22580.3 |
| hypothetical protein | ALFI_RS17130 | Not Available | Positive | 2000808 - 2000957 | 5786.46 |
| voc family protein | ALFI_RS08765 | Not Available | Positive | 2001051 - 2001452 | 14893.8 |
| duf488 domain-containing protein | ALFI_RS08770 | Not Available | Positive | 2001449 - 2001823 | 14557.3 |
| hded family acid-resistance protein | ALFI_RS08775 | Not Available | Negative | 2002102 - 2002686 | 21216.9 |
| mbl fold metallo-hydrolase | ALFI_RS08780 | Not Available | Negative | 2003000 - 2004124 | 42451.9 |
| multidrug dmt transporter permease | ALFI_RS08785 | Not Available | Positive | 2004344 - 2007462 | 107632.0 |
| multidrug dmt transporter permease | ALFI_RS08790 | Not Available | Positive | 2007465 - 2009095 | 57781.1 |
| hypothetical protein | ALFI_RS08795 | Not Available | Negative | 2009218 - 2009463 | 8723.01 |
| linear amide c-n hydrolase | ALFI_RS08800 | Not Available | Positive | 2009624 - 2010670 | 37999.0 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
