Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tspo/mbr family protein | ALFI_RS08660 | Not Available | Negative | 1981105 - 1981581 | 17561.1 |
| hypothetical protein | ALFI_RS08665 | Not Available | Negative | 1981755 - 1981964 | 7278.16 |
| alpha-amylase | ALFI_RS08670 | Not Available | Negative | 1982151 - 1983593 | 54686.7 |
| manganese catalase family protein | ALFI_RS08675 | Not Available | Negative | 1983705 - 1984676 | 36238.3 |
| hypothetical protein | ALFI_RS08680 | Not Available | Negative | 1984719 - 1985006 | 10751.9 |
| hypothetical protein | ALFI_RS08685 | Not Available | Negative | 1985018 - 1985287 | 9621.93 |
| spondin domain-containing protein | ALFI_RS08690 | Not Available | Negative | 1985354 - 1986601 | 43872.8 |
| vit1/ccc1 transporter family protein | ALFI_RS08695 | Not Available | Positive | 1986955 - 1987809 | 31664.2 |
| pepsy-like domain-containing protein | ALFI_RS08700 | Not Available | Positive | 1987989 - 1988423 | 15720.9 |
| sos response-associated peptidase | ALFI_RS08705 | Not Available | Positive | 1988526 - 1989212 | 26441.0 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
